Ns M, Bandyopadhyay P, Hillyard DR: Speciation of cone snails and
Ns M, Bandyopadhyay P, Hillyard DR: Speciation of cone snails and interspecific hyperdivergence of their venom peptides: potential evolutionary PubMed ID:http://www.ncbi.nlm.nih.gov/pubmed/27766426 significance of introns. Ann NY Acad Sci 1999, 870:223?37. Crow KD, Amemiya CT, Roth J, Wagner GP: Hypermutability of HoxA13a and functional divergence from its paralog are associated with the origin of a novel developmental feature in zebrafish and related taxa (cypriniformes). Evolution 2009, 63:1574?592. Inoue K, Lupski J: Molecular mechanisms for genomic disorders. Annu Rev Genom Hum G 2002, 3:199?42. Veltman JA, Brunner HG: De novo mutations in human genetic disease. Nat Rev Genet 2012, 13:565?75. Voight BF, Kudaravalli S, Wen X, Pritchard JK: A map of recent positive selection in the human genome. PLoS Biol 2006, 4:446?58. Crespi BJ, Summers K: Positive selection in the evolution of cancer. Biol Rev 2006, 81:407?24. Dawkins R: The Blind Watchmaker: Why the Evidence of Evolution Reveals a Universe Without Design. New York: WW Norton Company; 1986. Ohno S: Evolution by Gene Duplication. Heidelberg: Springer-Verlag; 1970. Siepel A: Darwinian alchemy: Human genes from noncoding DNA. Genome Res 2009, 19:1693?695. Levine MT, Jones CD, Kern AD, Lindfors HA, Begun DJ: Novel genes Aprotinin biological activity derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression. P Natl Acad Sci USA 2006, 103:9935?939. Begun DJ, Lindfors HA, Kern AD, Jones CD: Evidence for de novo evolution of testis-expressed genes in the Drosophila yakuba/Drosophila erecta clade. Genetics 2007, 176:1131?137. Chen ST, Cheng HC, Barbash DA, Yang HP: Evolution of hydra, a recently evolved testis-expressed gene with nine alternative first exons in Drosophila melanogaster. PLoS Genet 2007, 3:1131?143. Zhou Q, Zhang G, Zhang Y, Xu S, Zhao R, Zhan Z, Li X, Ding Y, Yang S, Wang W: On the origin of new genes in Drosophila. Genome Res 2008, 18:1446?455. Toll-Riera M, Bosch N, Bellora N, Castelo R, Armengol L, Estivill X, Alba MM: Origin of primate orphan genes: A comparative genomics approach. Mol Biol Evol 2009, 26:603?12. Wu DD, Irwin DM, Zhang YP: De novo origin of human protein-coding genes. PLoS Genet 2011, 7:e1002379. Tautz D, Domazet-Loso T: The evolutionary origin of orphan genes. Nat Rev Genet 2011, 12:692?02. Xie C, Zhang YE, Chen JY, Liu CJ, Zhou WZ, Li Y, Zhang M, Zhang R, Wei L, Li CY: Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs. PLoS Genet 2012, 8:e1002942. Neme R, Tautz D: Phylogenetic patterns of emergence of new genes support a model of frequent de novo evolution. BMC Genomics 2013. 14. doi:10.1186/1471?164?4?17. Babushok DV, Ohshima K, Ostertag EM, Chen X, Wang Y, Mandal PK, Okada N, Abrams CS, Kazazian Jr HH: A novel testis ubiquitin-binding203.204.205.206.207. 208. 209. 210. 211. 212.213.214. 215.216. 217.218. 219. 220.221.222.223. 224.225. 226. 227. 228.protein gene arose by exon shuffling in hominoids. Genome Res 2007, 17:1129?138. Zhang Y, Lu S, Zhao S, Zheng X, Long M, Wei L: Positive selection for the male functionality of a co-retroposed gene in the hominoids. BMC Evol Biol 2009, 9:252. Lynch VJ, Nnamani M, Brayer KJ, Emera D, Wertheim JO, Kosakovsky-Pond SL, Grutzner F, Bauersachs S, Graf A, Kapusta A, Feschotte C, Wagner GP: Lineage-specific transposons drove massive gene expression recruitments during the evolution of pregnancy in mammals. arXiv preprint 2012, arXiv:1208.4639. Emera D, Wagner GP: Transposable element recruitments in the.
